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Inside the archive there are two tables containing all SUS-BAR annotation.

  • For clustered pig sequences are reported all validated annotations.
  • For singleton pig sequences is reported the original SwissProtKB annotation: all Pfam terms and experimental GO terms.


Table columns description

All colums in both tables are separated with a TAB character.


table_cl_pig.txt :

  1. Sequence name (UniProtKB or ENSEMBL identification code)
  2. Sequence hash (calculated with the SEGUID python module)
  3. Cluster ID (cluster identification number in SUS-BAR)
  4. Ontology (possible values: "cc", "bp", "mf" or "pfam")
  5. Term ID (the term identification code i.e. "GO:0034641", "PF00096")
  6. Term description (The term description i.e. "RNA biosynthetic process")

table_singleton_pig.txt :

  1. Sequence name (UniProtKB or ENSEMBL identification code)
  2. Sequence hash (calculated with the SEGUID python module)
  3. Ontology (possible values: "cc", "bp", "mf" or "pfam")
  4. Term ID (the term identification code i.e. "GO:0034641", "PF00096")
  5. Term description (The term description i.e. "RNA biosynthetic process")

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