Inside the archive there are two tables containing all SUS-BAR annotation.
- For clustered pig sequences are reported all validated annotations.
- For singleton pig sequences is reported the original SwissProtKB annotation: all Pfam terms and experimental GO terms.
Table columns description
All colums in both tables are separated with a TAB character.
table_cl_pig.txt :
- Sequence name (UniProtKB or ENSEMBL identification code)
- Sequence hash (calculated with the SEGUID python module)
- Cluster ID (cluster identification number in SUS-BAR)
- Ontology (possible values: "cc", "bp", "mf" or "pfam")
- Term ID (the term identification code i.e. "GO:0034641", "PF00096")
- Term description (The term description i.e. "RNA biosynthetic process")
table_singleton_pig.txt :
- Sequence name (UniProtKB or ENSEMBL identification code)
- Sequence hash (calculated with the SEGUID python module)
- Ontology (possible values: "cc", "bp", "mf" or "pfam")
- Term ID (the term identification code i.e. "GO:0034641", "PF00096")
- Term description (The term description i.e. "RNA biosynthetic process")